Simplicity: Web-Based Visualization and Analysis of High-Throughput Cancer Cell Line Screens

Authors

  • Alexander L. Ling Author
  • Weijie Zhang Author
  • Adam Lee Author
  • Yunong Xia Author
  • Mei-Chi Su Author
  • Robert F. Gruener Author
  • Sampreeti Jena Author
  • Yingbo Huang Author
  • Siddhika Pareek Author
  • Yuting Shan Author
  • R. Stephanie Huang. Author

Abstract

High-throughput drug screens are a powerful tool for cancer drug development. However, the results of such screens are often made available only as raw data, which is intractable for researchers without informatics skills, or as highly processed summary statistics, which can lack essential information for translating screening results into clinically meaningful discoveries. To improve the usability of these datasets, we developed Simplicity, a robust and user-friendly web interface for visualizing, exploring, and summarizing raw and processed data from high- throughput drug screens. Importantly, Simplicity allows for easy recalculation of summary statistics at user-defined drug concentrations. This allows Simplicity’s outputs to be used with methods that rely on statistics being calculated at clinically relevant doses. Simplicity can be freely accessed at https://oncotherapyinformatics.org/simplicity/.

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Published

2023-12-08